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ABHISHEK KUMAR MALAKAR
Present Address
C/o Mr. Jai Karan Nath Saini,
Hari Chand Inter College,
Sadar Bazar, Cantt,
Lucknow-226002
E-mail: abhishekmalakar@gmail.com, abhishekmalakar@yahoo.co.in
Phone: +919450373796, +919415770307
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OBJECTIVE:
Looking for a career, which can provide satisfaction and opportunity for learning and applying knowledge to gain wide experience.
WORKING EXPERIENCE:
Presently I am working as Research Scholar on DNA BARCODING project under the guidance of Dr. W. S. Lakra & Dr. M.S. Verma in International Centre for DNA Barcoding at National Bureau of Fish Genetic Resources (NBFGR) Lucknow.
PROFESSIONAL QUALIFICATION:
Masters of Science in Botany from CSJM University Kanpur in year 2002-2004 (First Division), Special Paper: Plant Pathology.
ACADEMIC QUALIFICATIONS:
• B.Sc. From J.N.P.G.College, Lucknow (University of Lucknow) in 2002
MOLECULAR BIOLOGY TECHNIQUES:
(DNA Related)
DNA isolation and purification (from Blood/Fin/Tissue), PCR, Sequencing, Sequence analysis and DNA BARCODING.
(Protein Related)
SDS PAGE, Agarose Gel Electrophoresis.
Microbiological Techniques:
Basic Microbiological techniques, Culturing of different strains, strain improvement.
Software’s used:
MEGA4.0, DNA-SP4.9, Phylo-win, PHYLIP, CLUSTAL, MEGALIGN, DNAstar, Biovis image Sequence Analysis, Auto assembler, SeqEdit, BLAST, FASTA, (All these software’s are related to Phylogenetic and DNA analysis), PopGen32, TFPGA and Literature database: Pubmed.
BIOINFORMATICS SKILLS:
Search Tools - Basic Local Alignment Search Tool (BLAST), ENTREZ etc.
Biological Databases:
1. Nucleotide Databases:
GenBank, European Molecular Biology Laboratory (EMBL), DNA Data Bank of Japan.
2. Protein Databases: Protein Data Bank (PDB), SWISS-PROT.
3. Reference Databases: National Center for Biotechnology Information (NCBI)
4. Biological Softwares: BioEdit, Cn-3D, Swiss PDB Viewer, Rasmol, ORF-Finder, JalView , TreeView,
DNAtool, Chemsketch, DTMM, Clustal Package, Primer designing (Primer 3).
5. Sequence submission tools: Sequin, BankIt, Sakura
COMPUTATIONAL SKILLS:
Operating Systems : Windows 98/2000/XP, MS-DOS
Other software’s : Macromedia Dreamweaver Mx, Flash, MS Power point, Swiss-max., Adobe
PhotoShop.
PROJECTS UNDERTAKEN:
Project – I
Developed a “Database on Exotic Fishes of India” at National Bureau of Fish Genetic Resources, Lucknow under the supervision of Dr. A.K.Pathak, (Scientist), NBFGR, Lucknow.
Project – II
Developed a “Database on Japanese Encephalitis Virus”
Designation: Developer
Team Size: Three
Software used: Macromedia Dreamweaver, Flash, Fireworks.
Overview: Website for providing full information on Japanese Encephalitis Virus disease.
WORKSHOP/ SEMINAR/ SYMPOSIUM ATTENDED:
• Attended 12 days “training programme on Recent Advances in Molecular Markers & their applications” organized at National Bureau of Fish Genetic Resources, Lucknow. (12-23 January 2009).
• Participated in workshop on “Intellectual Property & Technology Management” at National Bureau of Fish Genetic Resources, Lucknow on December, 18 – 20, 2008.
• Attended one day “International Workshop on DNA Barcoding” NASC Complex, New Delhi organized by: National Bureau of Fish Genetic Resources, Lucknow (4 December 2008).
• Participated as a training faculty in “International Hands-on Training on DNA Bar Coding of Marine Life” in April 16-21 2007 in National Bureau of Fish Genetic Resources, Lucknow (sequence analysis by DNA Star & Mega Base).
• Attended 9 days hands-on training on “Molecular Markers and Genetic Diversity Analysis” from March 12-21 2007 in National Bureau of Fish Genetic Resources, Lucknow.
• Presentation: Sequence Database & Information Retrieval (PubMed) in National Bureau of Fish Genetic Resources, Lucknow May 2006.
• Two months training program on “Tools & Applications in Bioinformatics” organized by The Bionformatica Solutions, Lucknow (Aug’05- Oct’05).
• Participated in workshop on “Sequence Comparison: Importance & Algorithms” organized by The Bioinformatica Solutions, Lucknow.
• National seminar on “Recent Emerging Trends in Plant Science” 11-12 December 2004, in DAV College Kanpur.
• Attended “National Seminar on Anthropogenic Stresses on Environment & Sustainable Development” held in Kanpur on 17-18th October 2004 (A.N.D.College, Kanpur).
PAPER PRESENTED/ PUBLISHED AS ABSTRACTS:
• B. K. Gupta, Abhishek Kr. Malakar, V. K. Dubey, A. Pandey & R. Sani, “Present Status of Fish Biodiversity of River Gomti”, 28th Annual session of The Academy of Environmental Biology & National Symposium on “Environmental Stress & Bioresources Management” Department of Botany, Jamia Hamdard (Hamdard University), New Delhi, November 20-22, 2008.
• A. Malhotra, N. Jaiswal, H.R. Singh, M.S. Verma, W.S. Lakra. Abhishek Kr. Malakar, S.C. Sharma and S. K. Malhotra, “Barcode of life to demonstrate fish helminth genetic transformations of evolutionary potential”, National Conference on “Aquatic Genetic Resources”, National Bureau of Fish Genetic Resources, Lucknow, April 26-27, 2008.
• Abhishek Kr. Malakar, M. Mishra, A. Jaiswal, S. Mishra, K. V. Singh, "In Silico Identifications of Functional Domains and Active Site of Virulence (Pathogenicity) related Genes (XC4223 & XC 2827) in Xanthomonas spp." (Paper code: CBT-65) has been accepted for presentation in our National Conference on "BIOTECHNOLOGY FOR HUMAN WELFARE" scheduled to be held during 20 - 21 July 2007 at Coimbatore Institute of Technology, Coimbatore, India.
• Abhishek Kr. Malakar, A. Jaiswal, M. Mishra, S. Mishra, K. V. Singh “In Silico Analysis of the Surface Active Proteins of Importance in Biological Control Agents” (PIN: P- 47), ) has been accepted for presentation in our National Conference on “BANGALORE BIO-2007” scheduled to be held during 8 - 9 June 2007 at Bangalore International Exhibition Center (Bangalore), India.
• Abhishek Kr. Malakar, S. Mishra, M. Mishra, A. Jaiswal, K. V. Singh, "A Computational Approaches to study active compounds in medicinal plants" (Paper code: CBT-64) has been accepted for presentation in our National Conference on "BIOTECHNOLOGY FOR HUMAN WELFARE" scheduled to be held during 20 - 21 July 2007 at Coimbatore Institute of Technology, Coimbatore, India.
• A.K. Jaiswal, S. Singh, Abhishek Kr. Malakar, M. Mishra, M. Yadav, S. Khanduri, "InSilico Identification of Residues Responsible for Crystallization of GTPase Proteins" published in “International Conference On Bioinformatics (INCOB) 2006”, New Delhi.
• M. Manisha; Abhishek Kr. Malakar; Jaiswal A.; Biswas M., K. Santosh; Srivastava P.; Khanna VK. , “Phylogenetic Analysis & InSilico Identification of Poly & Non Structural Protein in Japanese Encephalitis Virus with other related Groups”, published in XXIV Annual Conference of Indian Academy Of Neurosciences (IAN) on December 17-20, 2006, at Lucknow, India.
SEQUENCE SUBMITTED TO NCBI/EMBL/DDBJ:
Nucleotide Sequence:
Gene Organisms Number of Sequences
Mitochondrial Cytochrome c oxidase subunit I (COI) gene Freshwater, Marine, Ornamental fishes and Nematode & Cestode 56
Mitochondrial Cytochrome b
(Cyt b) gene Hippocampus (Seahorse) 83
Mitochondrial 16S rRNA gene Hippocampus (Seahorse) & fishes 22
D-loop & tRNA –pro gene Freshwater fishes 2
Total Sequence - 163
Protein Sequence:
Gene Organisms Number of Sequences
Mitochondrial Cytochrome c oxidase subunit I (COI) gene Freshwater, Marine, Ornamental
fishes and Nematode & Cestode 53
Mitochondrial Cytochrome b
(Cyt b) gene Hippocampus (Seahorse) 75
Total Sequence - 138
EXTRACURRICULAR ACTIVITIES:
• An article published on Silver Jubli “MatsyaLok” annul report, “Bioinformatics ki Badhti upyogita” Abhishek Kr. Malakar, S. Mishra, M. S. Verma, National Bureau of Fish Genetic Resource, Lucknow 2008.
• An article published on Silver Jubli “MatsyaLok” annul report, “Medhak: Tere Kitne Roop? ”, Abhishek Kr. Malakar, D. Katiyar, K. Shyamakant, A. Siddiqui, S. Sharma, National Bureau of Fish Genetic Resource, Lucknow 2008.
• One year Diploma Course in Computer from DOEACC center Chandigarh.
• 2007: 2nd Prize award for computer in, DOEACC center Chandigarh.
• One year diploma in Urdu Language (National Council of Promotion of Urdu Language) New Delhi in 2006.
• Typing (English- 40wpm, Hindi- 25wpm).
MEMBERSHIP:
INDIAN ACADEMY OF NEUROSCIENCE (INDIA)
THE AMERICAN PHYTOPATHOLOGICAL SOCIETY (MN - USA)
PERSONAL PROFILE:
Nationality : Indian
Date of Birth : 10th January’1982
Languages known : Hindi and English
Gender : Male
Marital status : Single
REFERENCE:
I hereby declare that all the information mentioned above is true to the best of my knowledge.
Date:
Place: (Abhishek kr. Malakar) |
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